This list is arranged by drainage basin, with respective tributaries indented under each larger stream's name.
Atlantic Ocean
- Sixaola River
- San San River
- Teribe River
- Guariviara River
- Cricamola River
- Calovebora River
- Cocle del Norte River
- Indio River
- Chagres River
- Cascajal River
- Nombre de Dios River
- Cangandi River